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Income Tax Notice for Salaried Employees: Types & How to Reply

Most income tax notices that salaried employees receive are not about tax evasion. They come from mismatches between your return and the data the department already has: Form 16, Form 26AS and the Annual Information Statement (AIS). Typical causes are FD interest you didn't report, a second employer's salary, or HRA and 80C claims your employer didn't allow.

The most common communications are:

  • 143(1) intimation: your return has been processed.
  • 143(1)(a) proposal: the department plans an adjustment; reply within 30 days.
  • 139(9) defective return: your return needs correcting; reply within 15 days.

This guide explains each notice, how to reply on the portal, what happens if you don't, and how to avoid notices next year.

Income tax notice for salaried employees: section 143(1) intimation, 143(1)(a) adjustment and 245 refund set-off in 30 days, 139(9) defective return in 15 days, 142(1), 143(2) and 148 as stated

First: check the notice is genuine

Every genuine notice carries a Document Identification Number (DIN), and you can verify it on incometax.gov.in. Genuine notices also appear after login under Pending Actions → e-Proceedings. Never pay through a link in an email or SMS. See how to authenticate an income tax notice.

Types of notices salaried employees get

143(1)Routine
Intimation
Return processed: no change, refund or demand
Do: Compare with your return; pay or rectify
143(1)(a)Respond in 30 days
Adjustment proposal
Mismatch found before processing
Do: Agree or disagree online with reasons
139(9)Respond in 15 days
Defective return
Wrong form or missing details
Do: File a corrected return in response
245Respond in 30 days
Refund adjustment
Refund to be set off against old demand
Do: Agree, or disagree with proof
142(1) / 143(2)Serious
Inquiry / scrutiny
Officer wants documents or detailed review
Do: Submit proof in e-Proceedings; consider a CA
148A / 148Serious
Reassessment
Income may have escaped tax
Do: Reply with evidence; take professional help
Section (Income-tax Act, 1961)What it isTime to respondIf ignored
143(1)Intimation after processingNo reply needed if correct; rectification under section 154 if wrongAny demand becomes payable, with interest
143(1)(a)Proposed adjustment for a mismatch30 daysThe adjustment is made without your input
139(9)Defective return15 days (extension possible)The return is treated as never filed
245Refund set off against an old demand30 daysThe refund is adjusted
156Notice of demand30 days to pay or contestInterest, and recovery action
142(1)Request for information or documents, or to file a returnAs stated in the noticePenalty of ₹10,000 (271(1)(b)); best-judgement assessment
143(2)Scrutiny assessmentAs stated in the noticePenalty and best-judgement assessment
148A / 148Reassessment: income may have escaped taxAs stated in the show-cause noticeReassessment, tax, interest and penalty

Reassessment is generally limited to 3 years from the end of the assessment year. It extends to 5 years where the escaped income is ₹50 lakh or more. For tax year 2026-27 onwards, notices are issued under the Income-tax Act, 2025, with new section numbers, but the process is similar.

Why salaried employees get notices

Most common triggers for salaried taxpayers
  1. Savings or FD interest in AIS not reported in the return
  2. Two employers in one year, with only one Form 16 reported
  3. TDS in Form 26AS different from the return (wrong PAN, deductor delay)
  4. HRA or 80C/80D claims in the return that the employer did not allow, without proof
  5. Capital gains, dividends or ESOP/RSU income missing
  6. High-value transactions in AIS (cash deposits, property, investments) not matching income
  7. Not filing a return although income or TDS required it

The department matches your return against AIS and Form 26AS automatically, so even small gaps, like ₹5,000 of interest, can produce a 143(1)(a) proposal or a demand. See TDS mismatch notices for the most common case.

How to respond on the portal

  1. Log in at incometax.gov.in and open Pending Actions → e-Proceedings. Intimations and orders are under Pending Actions → Worklist and in your registered email.
  2. Read the notice: section, assessment year, the issue raised, and the deadline.
  3. Compare your return with Form 16, Form 26AS and AIS to see whether the department is right.
  4. Choose your response:
    • agree and pay;
    • disagree with reasons and proof;
    • file a rectification under section 154, for an error in an intimation;
    • file a revised return, if still within the time limit; for AY 2026-27 this runs until 31 March 2027, with a fee after 31 December 2026;
    • for a defective return, file the corrected return in response to the 139(9) notice.
  5. Upload documents as clear PDFs: Form 16, interest certificates, rent receipts with your landlord's PAN, investment proofs, bank statements.
  6. Submit and save the acknowledgement. If you need more time for a 142(1) or 143(2) notice, request an adjournment online before the deadline.
Sample response: 143(1)(a) adjustment for missed interest
Subject: Response to proposed adjustment u/s 143(1)(a) – AY 2026-27 – PAN XXXXX1234X

I have reviewed the proposed adjustment of ₹8,200 relating to savings bank interest shown in AIS. I agree that this interest was not included in my return due to an oversight. I accept the adjustment and the resulting tax, and have attached the bank interest certificate.

[Name] · [Mobile] · [Email]

For scrutiny (143(2)) or reassessment (148A/148) notices, take advice from a chartered accountant before replying. What you say becomes part of the assessment record.

What happens if you ignore a notice

  • Interest: 1% a month under sections 234A, 234B and 234C on any tax that turns out to be due.
  • Non-compliance penalty: ₹10,000 under section 271(1)(b) for not complying with a 142(1) or 143(2) notice.
  • Under-reporting penalty: 50% of the tax on under-reported income under section 270A, or 200% for misreporting, such as fake claims.
  • Best-judgement assessment: the officer can assess your income without your input under section 144.
  • Prosecution: possible only in serious cases of wilful evasion or wilful failure to file. It is rare for honest salaried taxpayers who respond.

How to avoid notices next year

  1. Download AIS and Form 26AS before filing and match every entry. Give feedback on AIS entries you disagree with.
  2. Report all interest: savings, FD, RD and income-tax refund interest.
  3. If you changed jobs, include both employers' salary and TDS. Two employers each giving the basic exemption often leaves tax unpaid.
  4. Keep proof for every claim. For HRA, keep rent receipts and your landlord's PAN if rent exceeds ₹1 lakh a year. HRA, 80C and 80D apply only under the old regime.
  5. Declare RSUs and ESOPs and any foreign assets in Schedule FA. Many MNC employees miss this.
  6. File by the due date and e-verify within 30 days. See how to file ITR online.
  7. Keep records for at least 6–7 years: returns, Form 16, proofs and acknowledgements.

Frequently asked questions

Why did I, a salaried employee, get an income tax notice?

Usually because something in your return doesn't match Form 16, Form 26AS or AIS. Common causes are unreported interest, a second employer's salary, or claims without proof.

Is a 143(1) intimation a notice I must reply to?

Not if it shows no change or a refund. If it shows a demand you believe is wrong, file a rectification under section 154 or respond to the demand online.

How many days do I get to reply?

15 days for a defective return (139(9)), 30 days for a 143(1)(a) proposal or a refund adjustment (245), and the date stated in the notice for 142(1), 143(2) and 148A.

What is the penalty for not replying?

₹10,000 for not complying with a 142(1) or 143(2) notice, plus interest, a possible best-judgement assessment, and penalties of 50% or 200% on any under-reported tax.

Can I revise my return after a notice?

Yes, within the revised-return window and before assessment is completed. For AY 2026-27, that is up to 31 March 2027. For a 139(9) notice, file the corrected return as your response.

Will a salaried employee go to jail for a tax notice?

Not for a mismatch or a mistake. Prosecution is reserved for wilful evasion or wilful non-filing, and responding properly to notices avoids it.

Related guides

Sources

Updated October 2026. Section numbers refer to the Income-tax Act, 1961; similar provisions apply under the Income-tax Act, 2025 from tax year 2026-27. This is general information, not tax advice.

By
About the author
Vishvas YadavFounder, HR Calcy

Founder of HR Calcy and an independent HR and payroll consultant with 16+ years in Indian HR and payroll. PGDM in Human Resources from XLRI Jamshedpur, ISO 9001:2015 and ISO 27001:2022 Lead Auditor, with HR and payroll software implementations for multinational companies across several countries. Advises on payroll and statutory compliance, labour law (PF, ESI, CLRA, gratuity and bonus) and wage structuring. Based in Bengaluru, Karnataka.

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